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Intron Name: Anas_platyrhynchos_platyrhynchos_1_183820509_183824828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183820509 - 183824828

Intron Length:

4320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTATTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTCTTCATT

Flanking Amino Acid:

TASHLRMTPELFANVSGSLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

70.8

39.3

Major BPS

84.7

0.86

74.3

40.7

Major PPT

86.7

0.83

0.8

81.1

35.1

Minor 5ss

40.7

-1

3.1

57.7

46.5

Minor BPS

73.4

0.82

1.7

91.07

32.9

Associated Gene:

Gene:

OLFM4

Ensembl Gene ID:

ENSAPLG00000028342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045322

183768666 - 183842335

73670

ENSAPLT00000022216

183818440 - 183842335

23896