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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18411633_18412403_F

Intron Information:

Intron Rank:

140502

Intron Class:

major

Intron Phase:

Intron Coordinates:

18411633 - 18412403

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AACTAATGAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

77.9

0.69

0.8

75.9

Major PPT

73.5

0.53

69.2

46.1

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

41.7

-0.6

1.9

50.74

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046312

18411550 - 18418142

6593