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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18557685_18568338_R

Intron Information:

Intron Rank:

143620

Intron Class:

major

Intron Phase:

Intron Coordinates:

18557685 - 18568338

Intron Length:

10654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ACTGACCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TGTTACTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

0.36

0.9

55.4

40.4

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

55.6

0.26

79.08

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043929

18512910 - 18568469

55560

ENSAPLT00000028430

18498775 - 18568469

69695