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Intron Name: Anas_platyrhynchos_platyrhynchos_1_186029424_186052731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

186029424 - 186052731

Intron Length:

23308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTACAA

U12 Branch Point Sequence:

CTATACGTATTT

Flanking Amino Acid:

APPSRMSIIQTDNFPAEPNY

Intron Amino Acid Position:

873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

58.4

0.21

1.2

39.8

Major PPT

87.3

0.84

0.7

83.7

24.4

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

44.6

-0.3

2.3

65.34

45.4

Associated Gene:

Gene:

PCDH17

Ensembl Gene ID:

ENSAPLG00000014071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035375

186026551 - 186110623

84073

ENSAPLT00000014655

186026551 - 186110623

84073