Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_186918295_186976111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

186918295 - 186976111

Intron Length:

57817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGAAC

5'SS Class:

major

3'SS Sequence:

CTGTCTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATATTGAAAT

Flanking Amino Acid:

QRPVLKACNHENQKVQPEKS

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

67.6

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.8

76.1

32.5

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

50.7

0.1

1.7

69.85

40.1

Associated Gene:

Gene:

DIAPH3

Ensembl Gene ID:

ENSAPLG00000013619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041341

186918035 - 187129355

211321

ENSAPLT00000026714

186918035 - 187093749

175715

ENSAPLT00000014230

186918035 - 187129355

211321