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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18707474_18708288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18707474 - 18708288

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTATTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTGTTTTAAAT

Flanking Amino Acid:

IFAQPVNLKEVPDYLDHIKH

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.9

0.47

1.1

71.6

37.3

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

63.1

0.49

1.5

77.19

39.4

Associated Gene:

Gene:

BRD1

Ensembl Gene ID:

ENSAPLG00000015650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016336

18676579 - 18730407

53829