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Intron Name: Anas_platyrhynchos_platyrhynchos_1_187289109_187289693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

187289109 - 187289693

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTAT

5'SS Class:

major

3'SS Sequence:

TTTGTGTTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AGTTAATTAAAT

Flanking Amino Acid:

GPPPFVPFGQKCVSHVQVDS

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

70.7

35.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

77.1

0.61

70.3

44.5

Minor 5ss

43.8

-0.7

3.3

63.6

48.1

Minor BPS

55.1

0.24

1.9

75.56

39.9

Associated Gene:

Gene:

TDRD3

Ensembl Gene ID:

ENSAPLG00000014316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014967

187227520 - 187331267

103748