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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18779464_18783338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18779464 - 18783338

Intron Length:

3875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTATTCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

TATTCCTTACAG

Flanking Amino Acid:

SRFLEINSDWRYDKREDIKP

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

85.7

25.6

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

80.1

0.68

0.9

73.2

37.1

Minor 5ss

-0.2

2.5

66.4

45.1

Minor BPS

63.9

0.3

1.8

70.09

42.7

Associated Gene:

Gene:

ALG12

Ensembl Gene ID:

ENSAPLG00000015810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016493

18779130 - 18793101

13972

ENSAPLT00000037546

18779130 - 18789707

10578