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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18785355_18786620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18785355 - 18786620

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATT

Flanking Amino Acid:

HAVPAGIFCLGLTVAVDSLF

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.76

0.8

81.5

35.8

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

0.99

87.87

31.1

Associated Gene:

Gene:

ALG12

Ensembl Gene ID:

ENSAPLG00000015810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016493

18779130 - 18793101

13972

ENSAPLT00000037546

18779130 - 18789707

10578