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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18788551_18789065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18788551 - 18789065

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTAATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TTTCTTCTAATA

Flanking Amino Acid:

KMSKFYSQLIVRGSLGLSVI

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

80.3

0.68

0.8

77.9

29.4

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

59.1

0.28

1.6

72.85

32.8

Associated Gene:

Gene:

ALG12

Ensembl Gene ID:

ENSAPLG00000015810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037546

18779130 - 18789707

10578

ENSAPLT00000016493

18779130 - 18793101

13972