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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18789538_18792984_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

18789538 - 18792984

Intron Length:

3447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

TTAACAATAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAACCTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.6

46.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

58.8

0.2

53.1

40.2

Minor 5ss

41.9

-0.9

3.2

55.4

48.8

Minor BPS

73.6

0.74

1.2

75.3

35.3

Associated Gene:

Gene:

ALG12

Ensembl Gene ID:

ENSAPLG00000015810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016493

18779130 - 18793101

13972