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Intron Name: Anas_platyrhynchos_platyrhynchos_1_18794170_18795299_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18794170 - 18795299

Intron Length:
1130

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCGGGGT

5'SS Class:
major

3'SS Sequence:
TTTCGCTTACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAA

U12 Branch Point Sequence:
TATTACTTAAAT

Flanking Amino Acid:
CRGIVDRFNQGLADTAKKNF

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
64.1
42.1

Major BPS
74.4
0.61
0.9
63.9
34.9

Major PPT
77.4
0.62
0.9
70.4
40

Minor 5ss
24.4
-2.9
3.6
37.8
47

Minor BPS
73.6
0.82
1.6
88.19
35.8

Associated Gene:

Gene:
CRELD2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18793708 - 18805169
11462