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Intron Name: Anas_platyrhynchos_platyrhynchos_1_188288832_188289646_R

Intron Information:

Intron Rank:

132881

Intron Class:

major

Intron Phase:

Intron Coordinates:

188288832 - 188289646

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TTCCTTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GCATATTGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

76.7

0.6

78.1

28.1

Minor 5ss

31.6

-2.1

2.7

34.1

41.4

Minor BPS

48.5

-0.1

1.6

54.77

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023192

188288665 - 188294349

5685