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Intron Name: Anas_platyrhynchos_platyrhynchos_1_189659375_189661815_R

Intron Information:

Intron Rank:

149788

Intron Class:

major

Intron Phase:

Intron Coordinates:

189659375 - 189661815

Intron Length:

2441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TACTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AGTTCTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.3

69.2

43.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

81.4

0.71

0.7

77.5

30.9

Minor 5ss

36.9

-1.5

2.7

41.7

Minor BPS

64.6

0.54

1.6

79.91

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039227

189659201 - 189662227

3027