Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_19032645_19035195_R

Intron Information:

Intron Rank:

138183

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19032645 - 19035195

Intron Length:

2551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATTTCAG

5'SS Class:

major

3'SS Sequence:

CTCCCCTCACAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTCCCCTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

56.1

42.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.2

0.19

32.3

Minor 5ss

39.9

-1.1

2.8

46.4

44.2

Minor BPS

52.2

0.06

2.1

69.55

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024822

19032048 - 19057840

25793