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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192120714_192121626_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
192120714 - 192121626

Intron Length:
913

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAATTTTA

5'SS Class:
strong_major

3'SS Sequence:
ATCTTAATTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
ATCATCTTAATT

Flanking Amino Acid:
KRMKMDVFLPRFSIQSLFDL

Intron Amino Acid Position:
570

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
86
25

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
76.8
0.6
0.9
67.4
42.2

Minor 5ss
43.8
-0.7
2.8
58.6
45.8

Minor BPS
70.1
0.71
1.2
78.47
38.2

Associated Gene:

Gene:
SERPINE3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

192115036 - 192166193
51158

192115036 - 192191406
76371