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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192121826_192126469_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
192121826 - 192126469

Intron Length:
4644

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAACTGTC

5'SS Class:
major

3'SS Sequence:
TGCCCACCTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACTTCAA

U12 Branch Point Sequence:
ATTTGCCCACCT

Flanking Amino Acid:
TMHHTAEVNYGQFQTATLEP

Intron Amino Acid Position:
504

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.2
70.9
39.9

Major BPS
69.4
0.48
1
71.6
33.8

Major PPT
70.2
0.45
0.9
61.8
33.9

Minor 5ss
43.3
-0.7
3.2
61.8
43

Minor BPS
44.1
-0.3
2.4
71.44
45.1

Associated Gene:

Gene:
SERPINE3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

192115036 - 192166193
51158

192115036 - 192191406
76371