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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192127960_192131328_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
192127960 - 192131328

Intron Length:
3369

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAATGTAC

5'SS Class:
major

3'SS Sequence:
TCTCACCTGGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACATGAT

U12 Branch Point Sequence:
TCTCTCTCACCT

Flanking Amino Acid:
LQDALGYNIHDQSVQDFLHT

Intron Amino Acid Position:
360

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.1
64.6
35.8

Major BPS
63.3
0.33
1.1
53.7
41.6

Major PPT
70.2
0.46
1
65.6
35.7

Minor 5ss
37.2
-1.4
3.3
46.7
43.5

Minor BPS
52.2
0.15
1.9
73.07
43.9

Associated Gene:

Gene:
SERPINE3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

192115036 - 192191406
76371

192115036 - 192166193
51158