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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192182119_192191323_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
192182119 - 192191323

Intron Length:
9205

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGCGGG

5'SS Class:
major

3'SS Sequence:
CTTTGTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTAAC

U12 Branch Point Sequence:
TTTAACTGAAGT

Flanking Amino Acid:
DCGDSGAETGGSEYSRMSST

Intron Amino Acid Position:
28

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.1
54
45.2

Major BPS
80.9
0.77
0.8
81.7
25.4

Major PPT
86.3
0.82
0.8
80.6
31.4

Minor 5ss
29.9
-2.3
3.2
29.1
43.5

Minor BPS
54.2
0.21
2
79.07
42.4

Associated Gene:

Gene:
SERPINE3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

192151379 - 192191406
40028

192115036 - 192191406
76371