Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_192729885_192729968_R

Intron Information:

Intron Rank:

155566

Intron Class:

major

Intron Phase:

Intron Coordinates:

192729885 - 192729968

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACTAA

5'SS Class:

major

3'SS Sequence:

TCTCTTTATGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTGCAATAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

64.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

80.3

0.68

0.8

77.3

30.3

Minor 5ss

41.4

-1

3.2

55.4

48.8

Minor BPS

54.2

0.11

72.53

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024034

192728780 - 192730163

1384