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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_192789364_192789457_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
192789364 - 192789457
Intron Length:
94

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCG|GTGAGCCAA
5'SS Class:
major
3'SS Sequence:
TAATCTTTTGAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AAATAAA
U12 Branch Point Sequence:
TTTCCTGTAATC
Flanking Amino Acid:
LQRPAGLAVAVKEGCVGTTG
Intron Amino Acid Position:
251

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.8
0.58
1
61.5
40.8
Major BPS
62
0.3
1
62.3
30.4
Major PPT
71.1
0.47
1.1
71.9
37.7
Minor 5ss
32.2
-2
3
39.2
46.1
Minor BPS
60.1
0.3
2
75.34
35.5

Associated Gene:

Gene:
KCNRG
Ensembl Gene ID:
ENSAPLG00000025822
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035545
192788193 - 192792729
4537