Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_192873672_192875442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192873672 - 192875442

Intron Length:

1771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCTTTTTTATTT

Flanking Amino Acid:

LTHPKEKINKEAVWFLSNIT

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

79.1

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.4

0.75

0.7

81.8

28.8

Minor 5ss

47.3

-0.3

2.7

66.4

45.1

Minor BPS

58.3

0.34

1.6

71.36

40.7

Associated Gene:

Gene:

KPNA3

Ensembl Gene ID:

ENSAPLG00000007820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008172

192831814 - 192880366

48553

ENSAPLT00000008141

192857467 - 192880366

22900