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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192898871_192899288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192898871 - 192899288

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGCGG

5'SS Class:

major

3'SS Sequence:

TATCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGCATGTTATCT

Flanking Amino Acid:

WEACCSLLTGASRSEQTGGV

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

57.6

46.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.8

0.74

0.8

73.9

36.4

Minor 5ss

29.5

-2.3

3.3

38.6

46.5

Minor BPS

45.5

-0.2

2.3

64.61

45.8

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034204

192898318 - 192921477

23160

ENSAPLT00000018346

192898318 - 192921146

22829