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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192899452_192903725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192899452 - 192903725

Intron Length:

4274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTACTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

KNLALCKVLGKNFMRRSNIM

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.5

0.6

0.8

70.9

34.3

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042617

192898487 - 192921365

22879

ENSAPLT00000034204

192898318 - 192921477

23160

ENSAPLT00000018346

192898318 - 192921146

22829