Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_192903141_192903725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192903141 - 192903725

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTACTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

LAFNVVQLVFRNFMRRSNIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.5

0.6

0.8

70.9

34.3

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008681

192902945 - 192921365

18421