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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192908285_192909320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192908285 - 192909320

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTTTTTGCAATC

Flanking Amino Acid:

SSMAIVNNGEVYGWGYNGNG

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

75.6

0.58

75.5

38.6

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

49.3

-0

2.1

69.41

36.9

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008681

192902945 - 192921365

18421

ENSAPLT00000042617

192898487 - 192921365

22879

ENSAPLT00000034204

192898318 - 192921477

23160

ENSAPLT00000021380

192898281 - 192921365

23085

ENSAPLT00000018346

192898318 - 192921146

22829

ENSAPLT00000043397

192899757 - 192921365

21609