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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192910501_192912571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192910501 - 192912571

Intron Length:

2071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

ATACCTGTAAGT

Flanking Amino Acid:

SPLQIMMEKERVVEIAACHS

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

75.1

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

85.2

0.79

0.8

79.2

32.9

Minor 5ss

48.5

-0.1

2.8

43.2

Minor BPS

47.4

-0.1

2.2

68.41

42.5

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043397

192899757 - 192921365

21609

ENSAPLT00000021380

192898281 - 192921365

23085

ENSAPLT00000008681

192902945 - 192921365

18421