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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192911387_192912571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192911387 - 192912571

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

ATACCTGTAAGT

Flanking Amino Acid:

AFILLDSYNEMVVEIAACHS

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

75.2

35.8

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

85.2

0.79

0.8

79.2

32.9

Minor 5ss

-0.8

2.8

57.2

40.7

Minor BPS

47.4

-0.1

2.2

68.41

42.5

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042617

192898487 - 192921365

22879

ENSAPLT00000034204

192898318 - 192921477

23160

ENSAPLT00000018346

192898318 - 192921146

22829