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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192917311_192920402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192917311 - 192920402

Intron Length:

3092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

GATAATGAGACT

Flanking Amino Acid:

LSAAVRYDAEDLEEFCFKFC

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

81.7

0.71

0.8

81.5

30.4

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

37.8

-0.8

2.2

54.09

41.4

Associated Gene:

Gene:

RCBTB1

Ensembl Gene ID:

ENSAPLG00000008303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021380

192898281 - 192921365

23085

ENSAPLT00000018346

192898318 - 192921146

22829

ENSAPLT00000043397

192899757 - 192921365

21609

ENSAPLT00000008681

192902945 - 192921365

18421

ENSAPLT00000042617

192898487 - 192921365

22879

ENSAPLT00000034204

192898318 - 192921477

23160