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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192927845_192929760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192927845 - 192929760

Intron Length:

1916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAC

U12 Branch Point Sequence:

GTGTAGTGACCT

Flanking Amino Acid:

HDPGNRTNHYDAANKRKRHA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

63.6

0.34

1.2

55.1

42.1

Major PPT

82.5

0.73

0.9

76.3

37.7

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

41.6

-0.5

2.4

62.53

46.9

Associated Gene:

Gene:

PHF11

Ensembl Gene ID:

ENSAPLG00000008888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009249

192921928 - 192937603

15676