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Intron Name: Anas_platyrhynchos_platyrhynchos_1_192995405_193000044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

192995405 - 193000044

Intron Length:

4640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

GCTTCTTTAACA

Flanking Amino Acid:

IANLQLIDFEGKKDVSQIFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.2

37.7

Major BPS

74.2

0.6

39.4

Major PPT

77.3

0.61

0.9

72.9

36.2

Minor 5ss

26.7

-2.7

2.9

31.1

Minor BPS

79.9

0.94

1.1

79.83

36.4

Associated Gene:

Gene:

CAB39L

Ensembl Gene ID:

ENSAPLG00000009191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025341

192991781 - 193018261

26481

ENSAPLT00000009571

192983229 - 193018283

35055