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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193000164_193005024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193000164 - 193005024

Intron Length:

4861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGTGCT

5'SS Class:

major

3'SS Sequence:

TTCCATTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTTTTGATT

Flanking Amino Acid:

HPHILFMLLKGYESPNIALR

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

65.8

40.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.4

0.71

0.8

73.1

Minor 5ss

-2.5

3.3

32.2

42.4

Minor BPS

71.1

0.75

1.1

81.5

34.7

Associated Gene:

Gene:

CAB39L

Ensembl Gene ID:

ENSAPLG00000009191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025341

192991781 - 193018261

26481

ENSAPLT00000009571

192983229 - 193018283

35055