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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193005194_193009064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193005194 - 193009064

Intron Length:

3871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAG

U12 Branch Point Sequence:

TCTTAGGGAACC

Flanking Amino Acid:

IASDAFATFKDLLTRHKLLV

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

55.1

0.13

1.5

42.7

Major PPT

79.9

0.67

0.8

72.3

37.7

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

40.8

-0.7

2.7

59.87

Associated Gene:

Gene:

CAB39L

Ensembl Gene ID:

ENSAPLG00000009191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025341

192991781 - 193018261

26481

ENSAPLT00000009571

192983229 - 193018283

35055