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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193010658_193011334_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193010658 - 193011334

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

ATTTTCTCTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTTGTAATT

Flanking Amino Acid:

NYVTKRQSLKLLGELILDRH

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

38.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.9

0.74

0.7

77.9

30.3

Minor 5ss

29.4

-2.4

3.3

37.9

46.9

Minor BPS

0.55

86.64

33.8

Associated Gene:

Gene:

CAB39L

Ensembl Gene ID:

ENSAPLG00000009191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009571

192983229 - 193018283

35055

ENSAPLT00000025341

192991781 - 193018261

26481