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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193011479_193018081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193011479 - 193018081

Intron Length:

6603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGTTTGCATG

Flanking Amino Acid:

IQFEAFHVFKVFVASPNKTQ

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.5

Major BPS

0.62

1.4

85.7

34.9

Major PPT

64.7

0.33

1.1

63.5

42.8

Minor 5ss

37.7

-1.4

45.9

49.3

Minor BPS

44.5

-0.5

1.9

54.72

41.7

Associated Gene:

Gene:

CAB39L

Ensembl Gene ID:

ENSAPLG00000009191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009571

192983229 - 193018283

35055

ENSAPLT00000025341

192991781 - 193018261

26481