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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193064265_193064359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193064265 - 193064359

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCTGCTGTAAAA

Flanking Amino Acid:

PATIYYCRVQAVNVAGAGPF

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

83.6

0.76

0.8

77.6

35.6

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

45.5

-0.3

2.2

55.33

44.2

Associated Gene:

Gene:

FNDC3A

Ensembl Gene ID:

ENSAPLG00000009605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034178

193054486 - 193106907

52422

ENSAPLT00000026630

193055024 - 193165930

110907

ENSAPLT00000010156

193054486 - 193137065

82580