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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193086203_193092964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193086203 - 193092964

Intron Length:

6762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AGTCTCAAAAGT

Flanking Amino Acid:

ALLSNIAKPVVSDIQARTAL

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

82.9

0.74

0.8

76.8

37.1

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

42.9

-0.4

2.1

61.16

42.3

Associated Gene:

Gene:

FNDC3A

Ensembl Gene ID:

ENSAPLG00000009605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034178

193054486 - 193106907

52422

ENSAPLT00000026630

193055024 - 193165930

110907

ENSAPLT00000010156

193054486 - 193137065

82580