Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_193345430_193345874_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193345430 - 193345874

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

CTTCATTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGTCACTTAATC

Flanking Amino Acid:

QSPTKMTPRSRILVSIGESF

Intron Amino Acid Position:

699

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

62.7

44.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.8

0.58

72.5

37.3

Minor 5ss

46.2

-0.4

2.5

58.1

46.4

Minor BPS

67.4

0.53

1.5

74.1

Associated Gene:

Gene:

RB1

Ensembl Gene ID:

ENSAPLG00000007734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039977

193343176 - 193413276

70101

ENSAPLT00000008091

193341268 - 193409846

68579