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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193392422_193393235_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

193392422 - 193393235

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTTGAGTA

5'SS Class:

weak_major

3'SS Sequence:

AAAGAATCACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAGAAT

U12 Branch Point Sequence:

AATTCCAGAAAG

Flanking Amino Acid:

AEIGSQVTDVFLIYAFQEEQ

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.05

1.2

54.6

36.1

Major BPS

48.5

-0

1.4

56.1

37.3

Major PPT

45.3

-0.2

1.1

39.6

Minor 5ss

-1.2

3.4

54.2

44.1

Minor BPS

-0.2

1.9

59.12

41.4

Associated Gene:

Gene:

RB1

Ensembl Gene ID:

ENSAPLG00000007734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039977

193343176 - 193413276

70101