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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193403084_193403841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193403084 - 193403841

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ACATCACTAATT

Flanking Amino Acid:

CKEHDCNLDEVKNVYFTSFI

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

76.9

0.67

66.3

40.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

50.4

0.09

1.9

69.44

41.2

Associated Gene:

Gene:

RB1

Ensembl Gene ID:

ENSAPLG00000007734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008091

193341268 - 193409846

68579

ENSAPLT00000039977

193343176 - 193413276

70101