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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193403991_193405995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193403991 - 193405995

Intron Length:

2005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGATT

5'SS Class:

major

3'SS Sequence:

CCTGTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTGACTCTAACT

Flanking Amino Acid:

SPPAMLKEPYKSAVTAVTVN

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

76.6

38.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.3

0.7

0.8

72.4

37.7

Minor 5ss

40.4

-1.1

3.4

63.3

Minor BPS

57.7

0.32

1.7

74.33

42.2

Associated Gene:

Gene:

RB1

Ensembl Gene ID:

ENSAPLG00000007734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039977

193343176 - 193413276

70101

ENSAPLT00000008091

193341268 - 193409846

68579