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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193409847_193411779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193409847 - 193411779

Intron Length:

1933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GTTATAATAATC

Flanking Amino Acid:

FTELLKSISISVCTFFQFLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

94.5

0.6

29.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

47.6

-0.2

1.8

61.99

36.9

Associated Gene:

Gene:

RB1

Ensembl Gene ID:

ENSAPLG00000007734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039977

193343176 - 193413276

70101