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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193482548_193484170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193482548 - 193484170

Intron Length:

1623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGA

5'SS Class:

major

3'SS Sequence:

GTTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

AATTGCATAAAC

Flanking Amino Acid:

AALEDLELLARELIEILAIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

57.7

43.9

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

88.1

0.86

0.7

85.4

29.3

Minor 5ss

40.6

-1.1

3.4

56.3

47.8

Minor BPS

48.9

-0.1

2.1

64.73

Associated Gene:

Gene:

MED4

Ensembl Gene ID:

ENSAPLG00000008395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022484

193482399 - 193490829

8431

ENSAPLT00000008734

193482399 - 193490829

8431