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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193485175_193486119_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193485175 - 193486119

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TCTTAAAAAATA

Flanking Amino Acid:

KLKSIEKARKGAISSEEIIK

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.4

20.6

Major BPS

77.8

0.69

78.2

31.8

Major PPT

90.3

0.91

0.6

83.6

31.5

Minor 5ss

34.8

-1.7

2.8

44.9

43.2

Minor BPS

42.5

-0.5

2.2

58.3

41.3

Associated Gene:

Gene:

MED4

Ensembl Gene ID:

ENSAPLG00000008395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022484

193482399 - 193490829

8431

ENSAPLT00000008734

193482399 - 193490829

8431