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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193487543_193490056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193487543 - 193490056

Intron Length:

2514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGATTGACT

Flanking Amino Acid:

GDALAAGRLPDVLAPQYPWQ

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

80.2

0.68

0.8

71.6

38.2

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

59.2

0.37

2.1

82.86

38.1

Associated Gene:

Gene:

MED4

Ensembl Gene ID:

ENSAPLG00000008395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022484

193482399 - 193490829

8431

ENSAPLT00000008734

193482399 - 193490829

8431