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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193851662_193868962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193851662 - 193868962

Intron Length:

17301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

ATAACCTAATCT

Flanking Amino Acid:

DACRKLGIPEEKLCLPHHIL

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

83.9

0.76

0.8

77.1

37.1

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

51.3

0.12

72.23

44.2

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579