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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193869041_193869785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193869041 - 193869785

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TCTTTTTTTACA

Flanking Amino Acid:

ASIHVPSPAVPKLSMAKCRR

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

70.5

36.3

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

1.01

0.5

90.9

21.2

Minor 5ss

41.4

-1

2.8

50.8

41.1

Minor BPS

65.1

0.47

1.6

74.12

37.8

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020199

193851611 - 193967070

115460

ENSAPLT00000018395

193851611 - 193967070

115460

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000039134

193851611 - 193967070

115460

ENSAPLT00000032824

193851611 - 193967070

115460