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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193871043_193875841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193871043 - 193875841

Intron Length:

4799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTAAAAATCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTTAAAA

Flanking Amino Acid:

SIPSEGDSDNVFLRPQRNLE

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.6

0.31

55.3

43.2

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

71.8

0.68

1.3

77.35

32.8

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000032824

193851611 - 193967070

115460