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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193875947_193884171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193875947 - 193884171

Intron Length:

8225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

TGTGTTTGGACT

Flanking Amino Acid:

AIPFGLKPRSDPSLSLPPIS

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

70.5

36.1

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

67.8

0.4

0.8

62.7

26.8

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

52.3

0.15

1.6

71.61

39.7

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032824

193851611 - 193967070

115460

ENSAPLT00000015482

193849492 - 193967070

117579