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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193886919_193887455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193886919 - 193887455

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCATCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCTAAAGTAATT

Flanking Amino Acid:

MQMEMSSLGQKENAEEELEF

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.4

30.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.6

0.69

0.9

73.9

35.7

Minor 5ss

38.4

-1.3

49.1

47.1

Minor BPS

44.2

-0.3

2.3

66.73

43.9

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020199

193851611 - 193967070

115460

ENSAPLT00000018395

193851611 - 193967070

115460

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000039134

193851611 - 193967070

115460

ENSAPLT00000032824

193851611 - 193967070

115460